Using Quicken, you can record an expense related to an investment you hold, such as interest you paid on a margin loan. When you record this type of expense, Quicken deducts it from your account's cash balance.
Quicken tracks the following types of investment expense:
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Margin interest expense: Interest you paid on a security you bought on margin.
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Miscellaneous expense: Investment expenses that don't fit any of the categories above.
Each topic explains how to record that type of expense.